We consider the vorticity formulation of the Euler equations describing the flow of a two-dimensional incompressible ideal fluid on the sphere. Zeitlin's model provides a finite-dimensional approximation of the vorticity formulation that preserves the underlying geometric structure: it consists of an isospectral Lie--Poisson flow on the Lie algebra of skew-Hermitian matrices. We propose an approximation of Zeitlin's model based on a time-dependent low-rank factorization of the vorticity matrix and evolve a basis of eigenvectors according to the Euler equations. In particular, we show that the approximate flow remains isospectral and Lie--Poisson and that the error in the solution, in the approximation of the Hamiltonian and of the Casimir functions only depends on the approximation of the vorticity matrix at the initial time. The computational complexity of solving the approximate model is shown to scale quadratically with the order of the vorticity matrix and linearly if a further approximation of the stream function is introduced.

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