This paper develops a random-effects extension of the ergodic basic affine jump-diffusion (BAJD) model for a population of independent trajectories with individual unobserved jump intensities and common structural parameters. Under continuous-time observation, each intensity is estimated by the empirical jump frequency. We establish the strong consistency and stable mixed-normal limit of this estimator as the observation horizon tends to infinity. The estimated intensities are then used as pseudo-observations to construct a Bernstein-polynomial estimator of their common density. Its bias, variance, mean integrated squared error, and pointwise asymptotic normality are derived under a sequential asymptotic framework. The theory is developed for general positive jump-size distributions with finite activity and specialized to the Gamma$(k,λ)$ family, including the exponential and Erlang cases. For this family, we derive a pooled estimator of the common rate parameter and establish its consistency, asymptotic normality, and first-order conditional asymptotic independence from the individual intensity estimators. We also propose a consistent plug-in estimator of the population stationary mean. The methodology is illustrated through simulations and an empirical application to financial realized-volatility data.

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