Accurate numerical solutions of partial differential equations (PDEs) are crucial in numerous science and engineering applications. In this work, we introduce a novel neural PDE solver named AFDONet, which incorporates neural operator learning and adaptive Fourier decomposition (AFD) theory for the first time into a specifically designed variational autoencoder (VAE) structure, to solve a general class of nonlinear PDEs on smooth manifolds. AFDONet is the first neural PDE solver whose architectural and component design is fully guided by an established mathematical framework (in this case, AFD theory), turning neural operator design from an art to a science. Thus, AFDONet also exhibits exceptional mathematical explainability and groundness, and enjoys several desired properties. Furthermore, AFDONet achieves outstanding solution accuracy and competitive computational efficiency in several benchmark problems. In particular, thanks to its deep connections with AFD theory, AFDONet shows superior performance in solving PDEs on i) arbitrary (Riemannian) manifolds, and ii) datasets with sharp gradients. Overall, this work presents a new paradigm for designing explainable neural operator frameworks.

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