Recently, there has been a growing interest in the relationships between unrooted and rooted phylogenetic networks. In this context, a natural question to ask is if an unrooted phylogenetic network U can be oriented as a rooted phylogenetic network such that the latter satisfies certain structural properties. In a recent preprint, Bulteau et al. claim that it is computational hard to decide if U has a funneled (resp. funneled tree-child) orientation, for when the internal vertices of U have degree at most 5. Unfortunately, the proof of their funneled tree-child result appears to be incorrect. In this paper, we present a corrected proof and show that hardness remains for other popular classes of rooted phylogenetic networks such as funneled normal and funneled reticulation-visible. Additionally, our results hold regardless of whether U is rooted at an existing vertex or by subdividing an edge with the root.
翻译:近年来,无根与有根系统发育网络之间的关系日益受到关注。在此背景下,一个自然的问题是:能否将无根系统发育网络U定向为满足特定结构性质的有根系统发育网络?在最近的一篇预印本中,Bulteau等人声称,当U的内部顶点度数不超过5时,判定U是否存在漏斗定向(或漏斗树子定向)是计算困难的。遗憾的是,他们关于漏斗树子定向的证明似乎存在错误。本文给出了修正后的证明,并表明该困难性对其他常见的有根系统发育网络类别(如漏斗正规网络和漏斗网状可见网络)依然成立。此外,无论U是以现有顶点为根,还是通过将根与某条边的细分点相结合,我们的结果均成立。