SRAM-based FPGAs provide an attractive platform for energy- and latency-constrained CNN inference at the network edge, yet transient faults can lead to silent errors that compromise reliability. Always-on redundancy (e.g., full TMR) improves correctness but incurs substantial performance and energy overhead, while reactive recovery may introduce unacceptable latency on the critical path. We propose \textbf{ProWAFT}, a proactive workload-aware fault-tolerance framework for FPGA-based CNN accelerators that uses partial reconfiguration to selectively apply TMR across reconfigurable partitions. ProWAFT quantifies workload criticality, models fault propagation and reconfiguration overhead, and selects configurations that minimize a composite objective over latency, energy, and reliability risk. Implemented on a Xilinx Zynq UltraScale+ ZCU104 platform with six reconfigurable regions and evaluated on a 500-task trace derived from ResNet-18, MobileNetV2, and EfficientNet-Lite under time-varying SEU injection, ProWAFT achieves lower composite cost than static TMR and reactive reconfiguration while maintaining high task success rate and near-baseline throughput with low online decision overhead.

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